ZFIN ID: ZDB-GENE-080327-20
Gene Name: leucine rich repeat and fibronectin type III domain containing 5b
Gene Symbol: lrfn5b    Nomenclature History

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Previous Name: sc:d0350

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Is expressed in central nervous system and cranial ganglion. Orthologous to human LRFN5 (leucine rich repeat and fibronectin type III domain containing 5).
Genome Resources: Alliance (1),  Gene:555839 (1),  Ensembl(GRCz11):ENSDARG00000079396 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2008 [cssl:d0350]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13681 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lrfn5b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lrfn5b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lrfn5b-201 (1)    Ensembl 3592
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lrfn5b No data available
    MARKER RELATIONSHIPS
    lrfn5b Encodes: [EST] cssl:d0350 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_678483 (1) 3526 nt
    Genomic GenBank:CU655971 (1) 78638 nt
    Select Tool
    Polypeptide UniProtKB:F1RE98 (1) 765 aa
    Sequence Information (all 12)
    ORTHOLOGY for lrfn5b ( Chr: 20 )
    CITATIONS (16)