ZFIN ID: ZDB-GENE-080320-2
Gene Name: calcium channel, voltage-dependent, beta 4a subunit
Gene Symbol: cacnb4a
Sequence Ontology ID : SO:0000704

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Previous Names: CAB4a (1), cacnb4.2 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34703 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Ebert et al., 2008
    Observed in:
    DISEASE ASSOCIATED WITH cacnb4a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    episodic ataxia type 5 Episodic ataxia, type 5 613855
    {Epilepsy, juvenile myoclonic, susceptibility to, 6} 607682
    {Epilepsy, idiopathic generalized, susceptibility to, 9} 607682
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process epiboly involved in gastrulation with mouth forming second (more)
    Cellular Component voltage-gated calcium channel complex (more)
    Molecular Function voltage-gated calcium channel activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000584 (1)
  • InterPro:IPR001452 (1)
  • InterPro:IPR008079 (1)
  • InterPro:IPR008145 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR036028 (1)
  • PROSITE:PS50002 (1)
  • Pfam:PF00625 (1)
  • Pfam:PF12052 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cacnb4a-001 (1) 1568
    cacnb4a-002 (1) 1497
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cacnb4a No data available
    MARKER RELATIONSHIPS
    cacnb4aContained in: [BAC] DKEY-219C10 (order this)
    cacnb4aEncodes: [cDNA] MGC:198320 (1) (order this), MGC:198324 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001113519 (1) 2450bp
    Genomic GenBank:BX548038 (1) 173526bp
    Select Tool
    Polypeptide UniProtKB:B0F0D0 (1) 519aa
    Sequence Clusters UniGene:116506 (1)
    Sequence Information (all 26)
    OTHER cacnb4a GENE PAGES
  • Alliance (1)
  • Gene:562422 (1)
  • VEGA:OTTDARG00000025898 (1)
  • Ensembl(GRCz10):ENSDARG00000009738 (1)
  • ORTHOLOGY for cacnb4a (Chr: 9)
    CITATIONS (18)