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ZIRC
ZFIN ID: ZDB-GENE-080303-31
Gene Name: coiled-coil domain containing 88B
Gene Symbol: ccdc88b    Nomenclature History

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Previous Name: zgc:175202

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to localize to the centrosome and cytoplasm. Orthologous to human CCDC88B (coiled-coil domain containing 88B).
Genome Resources: Alliance (1),  Gene:100330741 (1),  Ensembl(GRCz11):ENSDARG00000076189 (2)
GENE EXPRESSION No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ccdc88b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ccdc88b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytoplasmic microtubule organization (more)
Cellular Component centrosome (more)
Molecular Function dynein light intermediate chain binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008636 (1)
  • InterPro:IPR036872 (1)
  • Pfam:PF05622 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ccdc88b-202 (1)    Ensembl 5067
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ccdc88b No data available
    MARKER RELATIONSHIPS
    ccdc88b Contained in: [BAC] CH211-119C18 (1) (order this), DKEY-226N24 (1) (order this)
    ccdc88b Encodes: [cDNA] MGC:175202 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128261 (1)
    Genomic GenBank:CU855924 (1) 153745 bp
    Select Tool
    Polypeptide UniProtKB:F1QPU7 (1) 1603 aa
    Sequence Clusters UniGene:118079 (1)
    Sequence Information (all 16)
    ORTHOLOGY for ccdc88b ( Chr: 14 )
    CITATIONS (18)