Gene

igdcc3

ID

ZDB-GENE-080303-24

Name

immunoglobulin superfamily, DCC subclass, member 3

Symbol

igdcc3 Nomenclature History

Previous Names

sc:d837

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Is expressed in several structures, including nervous system; neural plate; notochord; otic vesicle; and presumptive diencephalon. Orthologous to human IGDCC3 (immunoglobulin superfamily DCC subclass member 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

12 figures from Thisse et al., 2008

Cross-Species Comparison

High Throughput Data

Expression Atlas

Thisse Expression Data

cssl:d837 (23 images)
cssl:d0665 (15 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With igdcc3 Human Ortholog

No data available

Associated With igdcc3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013098	Immunoglobulin I-set
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin I-set	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype	Immunoglobulin subtype 2
UniProtKB:B0CLZ3 InterPro	656
UniProtKB:A4JYS8 InterPro	370
UniProtKB:F1RAD6 InterPro	773

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	igdcc3-201 (1) Ensembl	9575 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	igdcc3-002 (1) Ensembl	1560 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations