| ZFIN ID: ZDB-GENE-080303-1 |
| Gene Name: | si:ch73-380l3.2 | |||||||||||||
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| Gene Symbol: | si:ch73-380l3.2 Nomenclature History |
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Attributions
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| Previous Name: | sc:d136 (1) | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 15 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have sialic acid binding activity. Predicted to be involved in cell adhesion. Predicted to localize to plasma membrane. | |||||||||||||
| Genome Resources: | Alliance (1), Gene:100003913 (1), | |||||||||||||
Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.
| Directly Submitted Expression Data: | 1 figure (1 image) from Thisse et al., 2008 [cssl:d136] |
| Wild-type Stages, Structures: | Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h) |
| High Throughput Expression: | GEO (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa7237 | Point Mutation | Unknown | Premature Stop | ENU | |
| sa22707 | Point Mutation | Unknown | Premature Stop | ENU |
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| sa22708 | Point Mutation | Unknown | Splice Site | ENU |
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GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | cell adhesion (more) |
| Cellular Component | integral component of membrane (more) |
| Molecular Function | sialic acid binding (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
si:ch73-380l3.2-201
(1)
|
985 |
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| Browsers: NCBI |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM si:ch73-380l3.2
No data available
MARKER RELATIONSHIPS
| si:ch73-380l3.2 Contained in: | [BAC] DKEY-238D18 (1) (order this) |
| si:ch73-380l3.2 Encodes: | [cDNA] cssl:d136 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001098263 (1) | 1358 nt |
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| Genomic | GenBank:CR944667 (1) | 209310 nt | Blast at MegaBLAST |
| Polypeptide | UniProtKB:A4JYI6 (1) | 303 aa |
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ORTHOLOGY for si:ch73-380l3.2 (
Chr:
15
)
CITATIONS (14)