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ZIRC
ZFIN ID: ZDB-GENE-080225-33
Gene Name: reticulocalbin 1, EF-hand calcium binding domain
Gene Symbol: rcn1
Sequence Ontology ID : SO:0001217

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Previous Names: im:7158588, wu:fa06h02

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity. Predicted to localize to the endoplasmic reticulum. Is expressed in several structures, including axial mesoderm; chordo neural hinge; epidermis; head;  ...
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (19 images) from Thisse et al., 2004 [IMAGE:7158588]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1699 Point Mutation Unknown Splice Site ENU
sa20881 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20882 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25356 Point Mutation Unknown Premature Stop ENU
    sa45271 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rcn1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rcn1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rcn1-002 (1) 820
    mRNA rcn1-201 (1) 2039
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rcn1 No data available
    MARKER RELATIONSHIPS
    rcn1 Contained in: [BAC] CH73-122O16 (1) (order this)
    rcn1 Encodes: [EST] fa06h02, IMAGE:7158588 (1) (order this)
    rcn1 Has Artifact: [EST] fb64g03
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_686046 (1) 1909 bp
    Genomic GenBank:CT027842 (1) 38690 bp
    Select Tool
    Polypeptide UniProtKB:F1R369 (1) 320 aa
    Sequence Clusters UniGene:41005 (1)
    Sequence Information (all 14)
    ORTHOLOGY for rcn1 ( Chr: 7 )
    CITATIONS (21)