ZFIN ID: ZDB-GENE-080220-52
Gene Name: sharpin and rbck1 related
Gene Symbol: shrprbck1r
Sequence Ontology ID : SO:0000704

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Previous Names: sipl1-rbck1 (1), zgc:175152

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Landgraf et al., 2010
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7080 Point Mutation Unknown Premature Stop ENU
Targeting reagents:
PHENOTYPE
Data: Fig. 6 from Landgraf et al., 2010
Observed in:
DISEASE ASSOCIATED WITH shrprbck1r HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH shrprbck1r VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process embryonic cranial skeleton morphogenesis (more)
Cellular Component LUBAC complex (more)
Molecular Function ubiquitin binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001841 (1)
  • InterPro:IPR001876 (1)
  • InterPro:IPR002867 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR026168 (1)
  • InterPro:IPR026261 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR031912 (1)
  • InterPro:IPR036443 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS01358 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50199 (1)
  • PROSITE:PS51873 (1)
  • Pfam:PF00641 (1)
  • Pfam:PF01485 (1)
  • Pfam:PF16764 (1)
  • EC:2.3.2.31 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA shrprbck1r-001 (1) 4393
    shrprbck1r-002 (1) 3884
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM shrprbck1r No data available
    MARKER RELATIONSHIPS
    shrprbck1rContained in: [BAC] CH73-174H16 (1) (order this)
    shrprbck1rEncodes: [cDNA] MGC:175152 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001111200 (1) 3172bp
    Genomic GenBank:CU695007 (1) 91354bp
    Select Tool
    Polypeptide UniProtKB:A9JTG5 (1) 714aa
    Sequence Clusters UniGene:133684 (1)
    Sequence Information (all 15)
    OTHER shrprbck1r GENE PAGES
  • Alliance (1)
  • Gene:569903 (1)
  • VEGA:OTTDARG00000043937 (1)
  • Ensembl(GRCz11):ENSDARG00000059871 (2)
  • ORTHOLOGY for shrprbck1r (Chr: 7)
    CITATIONS (15)