ZFIN ID: ZDB-GENE-080220-10
Gene Name: solute carrier family 26 member 6, like
Gene Symbol: slc26a6l    Nomenclature History

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Previous Names: slc26a6c (1), zgc:175226

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Exhibits sodium:bicarbonate symporter activity. Involved in chloride transport. Predicted to localize to the integral component of plasma membrane. Is expressed in heart; kidney; and mesonephric duct. Orthologous to human SLC26A6 (solute carrier family 26 member 6).
Genome Resources: Alliance (1),  Gene:559448 (1),  Ensembl(GRCz11):ENSDARG00000054127 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9249 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38573 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-slc26a6l N/A 1
    PHENOTYPE
    Data: Fig. 11 from Bayaa et al., 2009
    Observed in:
    DISEASE ASSOCIATED WITH slc26a6l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc26a6l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chloride transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function sodium:bicarbonate symporter activity (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR001902 SLC26A/SulP transporter
    Domain IPR002645 STAS domain
    Domain IPR011547 SLC26A/SulP transporter domain
    Conserved_site IPR018045 Sulphate anion transporter, conserved site
    Family IPR030323 Solute carrier family 26 member 6
    Homologous_superfamily IPR036513 STAS domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc26a6l-201 (1)    Ensembl 2978
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc26a6l No data available
    MARKER RELATIONSHIPS
    slc26a6l Contained in: [BAC] CH211-157B11 (1)
    slc26a6l Encodes: [cDNA] MGC:175226 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114417 (1) 2983 bp
    Genomic GenBank:CR450814 (1) 158142 bp
    Select Tool
    Polypeptide UniProtKB:A9JTH4 (1) 808 aa
    Sequence Information (all 12)
    ORTHOLOGY for slc26a6l ( Chr: 6 )
    CITATIONS (20)