ZFIN ID: ZDB-GENE-080219-41
Gene Name: actin binding LIM protein 1a
Gene Symbol: ablim1a
Previous Name: zgc:172321
Location: Chr: 13   Details
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa10398
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytoskeleton organization (more)
Cellular Component cellular_component (more)
Molecular Function actin binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001781 (1)
  • InterPro:IPR003128 (1)
  • InterPro:IPR028448 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50023 (1)
  • PROSITE:PS51089 (1)
  • Pfam:PF00412 (1)
  • Pfam:PF02209 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ablim1a-001 (1) 4543
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ablim1a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ablim1a Contained in: [BAC] CH211-113P19 (1) (order this), DKEY-253O16 (1)
    ablim1a Encodes: [cDNA] MGC:172321 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114316 (1) 4570 bp
    Genomic GenBank:BX957309 (1) 169630 bp
    Select Tool
    Polypeptide UniProtKB:F1Q5C0 (1) 695 aa
    Sequence Clusters UniGene:86490 (1)
    Sequence Information (all 44)
    OTHER ablim1a GENE PAGES
  • Gene:100003558 (1)
  • VEGA:OTTDARG00000029495 (1)
  • Ensembl(Zv9):ENSDARG00000060149 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish ablim1a 13  
    Human ABLIM1 10 (10q25)
  • OMIM:602330
  • Gene:3983
  • Mouse Ablim1 19 ( 52.09 cM)
  • MGI:1194500
  • Gene:226251
  • Orthology Details
    CITATIONS (14)