ZFIN is now using GRCz12tu for Genomic Data
Gene
oscp1a
- ID
- ZDB-GENE-080204-2
- Name
- organic solute carrier partner 1a
- Symbol
- oscp1a Nomenclature History
- Previous Names
-
- oscp1
- zgc:171454
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA binding activity. Acts upstream of or within cilium assembly. Predicted to be located in membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human OSCP1 (organic solute carrier partner 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Zhao et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from van Dam et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | LSM domain superfamily | Organic solute carrier protein 1 | Sm domain | Sm domain, eukaryotic/archaea-type | U7 snRNA-associated Sm-like |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BLE8 | InterPro | 120 | |||||
| UniProtKB:A0A8M3AV86 | InterPro | 398 | |||||
| UniProtKB:A8KB18 | InterPro | 391 | |||||
| UniProtKB:A0AB32TAN6 | InterPro | 342 | |||||
| UniProtKB:A0AB32TCH2 | InterPro | 320 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
oscp1a-203
(1)
|
Ensembl | 1,733 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers