header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-080204-110
Gene Name: zgc:172271
Gene Symbol: zgc:172271
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity. Predicted to be involved in ion transport and iron ion homeostasis. Predicted to localize to the extracellular space.

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14356 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38574 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:172271 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:172271 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ion transport (more)
    Cellular Component extracellular region (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001156 (1)
  • InterPro:IPR016357 (1)
  • PROSITE:PS51408 (1)
  • Pfam:PF00405 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:172271-202 (1) 2415
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:172271 No data available
    MARKER RELATIONSHIPS
    zgc:172271 Contained in: [BAC] CH211-13J1 (1) (order this), DKEY-265K7 (1) (order this)
    zgc:172271 Encodes: [cDNA] MGC:172271 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114466 (1) 2414 bp
    Genomic GenBank:CR293534 (1) 109426 bp
    Select Tool
    Polypeptide UniProtKB:A9JRF6 (1) 733 aa
    Sequence Clusters UniGene:103534 (1)
    Sequence Information (all 16)
    ORTHOLOGY for zgc:172271 ( Chr: 6 )
    CITATIONS (13)