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ZIRC
ZFIN ID: ZDB-GENE-071116-6
Gene Name: class II, major histocompatibility complex, transactivator
Gene Symbol: ciita
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have activating transcription factor binding activity. Predicted to be involved in inflammatory response and positive regulation of macromolecule biosynthetic process. Human ortholog(s)  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20014 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ciita HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    MHC class II deficiency Bare lymphocyte syndrome, type II, complementation group A 209920
    rheumatoid arthritis {Rheumatoid arthritis, susceptibility to} 180300
    DISEASE ASSOCIATED WITH ciita VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Molecular Function ATP binding (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ciita-201 (1) 3810
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ciita No data available
    MARKER RELATIONSHIPS
    ciita Contained in: [BAC] CH211-59B16 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005163915 (1) 4093 bp
    Genomic GenBank:CU695195 (1) 88580 bp
    Select Tool
    Polypeptide UniProtKB:E7F3F4 (1) 1044 aa
    Sequence Clusters UniGene:114302 (1)
    Sequence Information (all 15)
    ORTHOLOGY for ciita ( Chr: 3 )
    CITATIONS (19)