ZFIN ID: ZDB-GENE-071004-97
Gene Name: CCR4-NOT transcription complex, subunit 6b
Gene Symbol: cnot6b    Nomenclature History

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Previous Name: zgc:171797

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have poly(A)-specific ribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to CCR4-NOT complex; cytoplasm; and nucleus. Orthologous to human CNOT6 (CCR4-NOT transcription complex subunit 6).
Genome Resources: Alliance (1),  Gene:560386 (1),  Ensembl(GRCz11):ENSDARG00000101072 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22556 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cnot6b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cnot6b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nuclear-transcribed mRNA poly(A) tail shortening (more)
    Cellular Component CCR4-NOT complex (more)
    Molecular Function poly(A)-specific ribonuclease activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cnot6b-201 (1)    Ensembl 8351
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cnot6b No data available
    MARKER RELATIONSHIPS
    cnot6b Contained in: [BAC] CH211-199B20 (1)
    cnot6b Encodes: [cDNA] MGC:171797 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001110028 (1) 2631 nt
    Genomic GenBank:AL935334 (1) 191828 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IF89 (1) 558 aa
    Sequence Information (all 10)
    ORTHOLOGY for cnot6b ( Chr: 14 )
    CITATIONS (14)