ZFIN ID: ZDB-GENE-070928-29
Gene Name: Aly/REF export factor
Gene Symbol: alyref    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: tho4, thoc4, zgc:171753

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Orthologous to human ALYREF (Aly/REF export factor).
Genome Resources: Alliance (1),  Gene:560127 (1),  Ensembl(GRCz11):ENSDARG00000077732 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH alyref HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH alyref VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function nucleic acid binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA alyref-201 (1)    Ensembl 1254
ncRNA alyref-002 (1) 790
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM alyref No data available
MARKER RELATIONSHIPS
alyref Contained in: [BAC] CH211-43F19 (1)
alyref Encodes: [cDNA] MGC:171753 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001105108 (1) 1277 nt
Genomic GenBank:CU693479 (1) 145296 nt
Select Tool
Polypeptide UniProtKB:A0A0R4IU36 (1) 291 aa
Sequence Information (all 11)
ORTHOLOGY for alyref ( Chr: 3 )
CITATIONS (20)