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Gene

col8a1a

ID
ZDB-GENE-070912-274
Name
collagen, type VIII, alpha 1a
Symbol
col8a1a Nomenclature History
Previous Names
  • Col8A1.1 (1)
  • col8a1 (1)
  • lev
  • gul (1)
  • gulliver (1)
  • leviathan
  • si:ch211-283e2.6 (1)
  • wu:fb18b08 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to be an extracellular matrix structural constituent. Acts upstream of or within head development and notochord formation. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including epidermis; hypochord; notochord; prechordal plate; and splanchnocranium. Orthologous to human COL8A1 (collagen type VIII alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
16 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
13 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col8a1a Human Ortholog
No data available
Associated With col8a1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001073 C1q domain
Homologous_superfamily IPR008983 Tumour necrosis factor-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length C1q domain Collagen triple helix repeat Tumour necrosis factor-like domain superfamily
UniProtKB:B7SW26 711
UniProtKB:B0S5W0 711
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations