ZFIN ID: ZDB-GENE-070912-270
Gene Name: PHD finger protein 20, a
Gene Symbol: phf20a
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch211-274p22.2

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity and nucleic acid binding activity; predicted to be involved in regulation of transcription, DNA-templated; predicted to localize to the MLL1 complex;  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1493 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12229 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21909 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa27790 Point Mutation Unknown Premature Stop ENU
    sa31829 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45429 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH phf20a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH phf20a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component MLL1 complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001965 (1)
  • InterPro:IPR002999 (1)
  • InterPro:IPR004092 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR036236 (1)
  • InterPro:IPR037915 (1)
  • InterPro:IPR041297 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00628 (1)
  • Pfam:PF02820 (1)
  • Pfam:PF18115 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA phf20a-201 (1) 4361
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM phf20a No data available
    MARKER RELATIONSHIPS
    phf20aContained in: [BAC] CH211-274P22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_686696 (1) 4383bp
    Genomic GenBank:CR848671 (1) 76453bp
    Select Tool
    Polypeptide UniProtKB:A8HAK1 (1) 932aa
    Sequence Clusters UniGene:83818 (1)
    Sequence Information (all 24)
    OTHER phf20a GENE PAGES
  • Alliance (1)
  • Gene:563332 (1)
  • VEGA:OTTDARG00000024969 (1)
  • Ensembl(GRCz11):ENSDARG00000002750 (2)
  • ORTHOLOGY for phf20a (Chr: 11)
    CITATIONS (20)