ZFIN ID: ZDB-GENE-070912-174
Gene Name: si:ch211-195h23.3
Gene Symbol: si:ch211-195h23.3
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: CARD-rel (1), Gene2604 (1), Gene38616 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
All Expression Data: Fig. 10 from Chang et al., 2010
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-195h23.3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-195h23.3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process negative regulation of NF-kappaB transcription factor activity (more)
Cellular Component nucleus (more)
Molecular Function cysteine-type endopeptidase activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001315 (1)
  • InterPro:IPR002398 (1)
  • InterPro:IPR011029 (1)
  • InterPro:IPR025307 (1)
  • InterPro:IPR033516 (1)
  • PROSITE:PS50209 (1)
  • PROSITE:PS51830 (1)
  • Pfam:PF00619 (1)
  • Pfam:PF13553 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:ch211-195h23.3-001 (1) 1830
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-195h23.3 No data available
    MARKER RELATIONSHIPS
    si:ch211-195h23.3Contained in: [BAC] CH211-195H23 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001130402 (1) 2459bp
    Genomic GenBank:CR847981 (1) 197506bp
    Select Tool
    Polypeptide UniProtKB:B0V1H3 (1) 478aa
    Sequence Clusters UniGene:78719 (1)
    Sequence Information (all 30)
    OTHER si:ch211-195h23.3 GENE PAGES
  • Alliance (1)
  • Gene:100170660 (1)
  • VEGA:OTTDARG00000025252 (1)
  • Ensembl(GRCz11):ENSDARG00000068431 (2)
  • ORTHOLOGY for si:ch211-195h23.3 (Chr: 2)
    CITATIONS (14)