Gene
carf
- ID
- ZDB-GENE-070912-172
- Name
- calcium responsive transcription factor
- Symbol
- carf Nomenclature History
- Previous Names
-
- als2cr8
- si:ch211-195c14.1
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human CARF (calcium responsive transcription factor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR029309 | Calcium-responsive transcription factor |
Domain Details Per Protein
| Protein | Length | Calcium-responsive transcription factor |
|---|---|---|
|
UniProtKB:A0A8M9QJZ7
|
561 | |
|
UniProtKB:A0A8M9QJZ6
|
668 | |
|
UniProtKB:A0A8M9PSK7
|
664 | |
|
UniProtKB:B0UYY8
|
661 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
carf-201
(1)
|
Ensembl | 2,001 nt | ||
| mRNA |
carf-203
(1)
|
Ensembl | 2,916 nt | ||
| mRNA |
carf-204
(1)
|
Ensembl | 642 nt | ||
| mRNA |
carf-207
(1)
|
Ensembl | 1,653 nt | ||
| ncRNA |
carf-002
(1)
|
Ensembl | 864 nt | ||
| ncRNA |
carf-003
(1)
|
Ensembl | 754 nt | ||
| ncRNA |
carf-004
(1)
|
Ensembl | 477 nt |
Interactions and Pathways
No data available
Plasmids
No data available