ZFIN ID: ZDB-GENE-070912-149
Gene Name: si:ch211-168k14.2
Gene Symbol: si:ch211-168k14.2    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity and phospholipase D activity. Predicted to be involved in cell motility. Predicted to localize to the Golgi apparatus. Orthologous to human PLD1 (phospholipase D1).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000056191 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026904Tg Transgenic Insertion Unknown Unknown DNA
sa6115 Point Mutation Unknown Premature Stop ENU
sa7193 Point Mutation Unknown Splice Site ENU
sa21513 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31724 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41451 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45362 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-168k14.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-168k14.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inositol lipid-mediated signaling (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001683 Phox homologous domain
    Domain IPR001736 Phospholipase D/Transphosphatidylase
    Family IPR015679 Phospholipase D family
    Family IPR016555 Phospholipase D, eukaryotic type
    Domain IPR025202 Phospholipase D-like domain
    Homologous_superfamily IPR036871 PX domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-168k14.2-201 (1)    Ensembl 1356
    si:ch211-168k14.2-203 (1)    Ensembl 1697
    ncRNA si:ch211-168k14.2-003 (1) 735
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-168k14.2 No data available
    MARKER RELATIONSHIPS
    si:ch211-168k14.2 Contained in: [BAC] CH211-168K14 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:BX571700 (1) 137898 bp
    Select Tool
    Polypeptide UniProtKB:F1RE58 (1) 452 aa
    Sequence Information (all 3)
    ORTHOLOGY for si:ch211-168k14.2 ( Chr: 9 )
    CITATIONS (15)