ZFIN ID: ZDB-GENE-070820-22
Gene Name: matrix metallopeptidase 25a
Gene Symbol: mmp25a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: mmp25, MMPLa (1), si:ch73-248e21.6

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to localize to extracellular space. Orthologous to human MMP25 (matrix metallopeptidase 25).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000077290 (1)
GENE EXPRESSION
All Expression Data: text only from Crawford et al., 2014
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11222 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17999 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mmp25a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mmp25a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component extracellular matrix (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA mmp25a-201 (1)    Ensembl 1737
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mmp25a No data available
    MARKER RELATIONSHIPS
    mmp25a Contained in: [BAC] CH73-248E21 (1), CH211-195G24
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    Genomic GenBank:AL928885 196857 nt
    Select Tool
    Polypeptide UniProtKB:I3IT28 (1) 578 aa
    Sequence Information (all 3)
    ORTHOLOGY for mmp25a ( Chr: 3 )
    CITATIONS (15)