ZFIN is now using GRCz12tu for Genomic Data
Gene
paplna
- ID
- ZDB-GENE-070815-4
- Name
- papilin a, proteoglycan-like sulfated glycoprotein
- Symbol
- paplna Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within extracellular matrix organization. Predicted to be located in extracellular region and plasma membrane. Orthologous to human PAPLN (papilin, proteoglycan like sulfated glycoprotein).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020901 | Proteinase inhibitor I2, Kunitz, conserved site |
| Domain | IPR002223 | Pancreatic trypsin inhibitor Kunitz domain |
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR010294 | ADAMTS/ADAMTS-like, Spacer 1 |
| Domain | IPR010909 | PLAC |
| Domain | IPR013098 | Immunoglobulin I-set |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Domain | IPR045371 | ADAMTS/ADAMTS-like, cysteine-rich domain 3 |
| Family | IPR013273 | ADAMTS/ADAMTS-like |
| Family | IPR050439 | ADAMTS and ADAMTS-like |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
| Homologous_superfamily | IPR036383 | Thrombospondin type-1 (TSP1) repeat superfamily |
| Homologous_superfamily | IPR036880 | Pancreatic trypsin inhibitor Kunitz domain superfamily |
| Repeat | IPR000884 | Thrombospondin type-1 (TSP1) repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | ADAMTS/ADAMTS-like | ADAMTS/ADAMTS-like, cysteine-rich domain 3 | ADAMTS/ADAMTS-like, Spacer 1 | ADAMTS and ADAMTS-like | Immunoglobulin domain subtype | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Immunoglobulin V-set domain | Pancreatic trypsin inhibitor Kunitz domain | Pancreatic trypsin inhibitor Kunitz domain superfamily | PLAC | Proteinase inhibitor I2, Kunitz, conserved site | Thrombospondin type-1 (TSP1) repeat | Thrombospondin type-1 (TSP1) repeat superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M1QL06 | InterPro | 1163 | |||||||||||||||||
| UniProtKB:A0A8M9P9Q0 | InterPro | 719 | |||||||||||||||||
| UniProtKB:A0A8M9PLN8 | InterPro | 881 | |||||||||||||||||
| UniProtKB:A0A8M9P0S4 | InterPro | 1187 | |||||||||||||||||
| UniProtKB:A0A8M9P0S8 | InterPro | 826 | |||||||||||||||||
| UniProtKB:A0AB32T5N8 | InterPro | 1090 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
paplna-201
(1)
|
Ensembl | 2,601 nt | ||
| mRNA |
paplna-202
(1)
|
Ensembl | 219 nt | ||
| mRNA |
paplna-203
(1)
|
Ensembl | 3,079 nt | ||
| mRNA |
paplna-204
(1)
|
Ensembl | 2,689 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers