ZFIN ID: ZDB-GENE-070815-1
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Gene Name: ADAM metallopeptidase with thrombospondin type 1 motif, 18
Gene Symbol: adamts18
Sequence Ontology ID : SO:0000704

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Previous Name: sb:eu2468

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Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2005 [eu2468]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  anterior axial hypoblast, brain, diencephalon, eye (all 24) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016124Tg Transgenic Insertion Unknown Unknown DNA
la016125Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026069Tg Transgenic Insertion Unknown Unknown DNA
    la026070Tg Transgenic Insertion Unknown Unknown DNA
    sa2353 Point Mutation Unknown Premature Stop ENU
    sa12213 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa14714 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa21040 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH adamts18 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Microcornea, myopic chorioretinal atrophy, and telecanthus 615458
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000884 (1)
  • InterPro:IPR001590 (1)
  • InterPro:IPR002870 (1)
  • InterPro:IPR010294 (1)
  • InterPro:IPR010909 (1)
  • InterPro:IPR013273 (1)
  • InterPro:IPR024079 (1)
    		•
  • PROSITE:PS50092 (1)
  • PROSITE:PS50215 (1)
  • PROSITE:PS50900 (1)
    		•
  • Pfam:PF00090 (1)
  • Pfam:PF01421 (1)
  • Pfam:PF01562 (1)
  • Pfam:PF05986 (1)
  • Pfam:PF08686 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA adamts18-001 (1) 7365
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM adamts18 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    adamts18Contained in: [BAC] DKEY-59H7 (order this), DKEY-273O8 (1) (order this)
    adamts18Encodes: [EST] eu2468 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009303403 (1) 4605bp
    Select Tool
    Genomic GenBank:BX511133 (1) 157916bp
    Select Tool
    Polypeptide UniProtKB:E7FEJ5 (1) 1244aa
    Select Tool
    Sequence Clusters UniGene:129936 (1)
    Sequence Information (all 11)
    OTHER adamts18 GENE PAGES
  • Gene:100150128 (1)
  • VEGA:OTTDARG00000035316 (1)
  • Ensembl(GRCz10):ENSDARG00000001999 (1)
    • ORTHOLOGY for adamts18 (Chr: 7)
    CITATIONS (17)