ZFIN ID: ZDB-GENE-070705-287
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Gene Name: si:dkey-119f1.1
Gene Symbol: si:dkey-119f1.1
Sequence Ontology ID : SO:0000704

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Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity; predicted to be involved in double-strand break repair via homologous recombination; predicted to localize to the Smc5-Smc6 complex, chromosome, telomeric  ...

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6006 Point Mutation Unknown Premature Stop ENU
sa14490 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa19667 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa38310 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa39763 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa39764 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:dkey-119f1.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:dkey-119f1.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to DNA damage stimulus (more)
    Cellular Component chromosome (more)
    Molecular Function ATP binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003395 (1)
  • InterPro:IPR027132 (1)
  • InterPro:IPR027417 (1)
    		•
  • Pfam:PF02463 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:dkey-119f1.1-001 (1) 4267
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-119f1.1 No data available
    MARKER RELATIONSHIPS
    si:dkey-119f1.1Contained in: [BAC] DKEY-119F1 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128334 (1) 3670bp
    Select Tool
    Genomic GenBank:BX927289 (1) 187503bp
    Select Tool
    Polypeptide UniProtKB:A5PN27 (1) 1090aa
    Select Tool
    Sequence Clusters UniGene:94251 (1)
    Sequence Information (all 10)
    OTHER si:dkey-119f1.1 GENE PAGES
  • Alliance (1)
  • Gene:557127 (1)
  • VEGA:OTTDARG00000023699 (1)
  • Ensembl(GRCz11):ENSDARG00000058719 (2)
    • ORTHOLOGY for si:dkey-119f1.1 (Chr: 2)
    CITATIONS (12)