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General Information
ZIRC
ZFIN ID: ZDB-GENE-070705-21
Gene Name: si:ch211-121a2.2
Gene Symbol: si:ch211-121a2.2
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tyrosine phosphatase activity and protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Orthologous to human DUPD1  ...

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39270 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43382 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-121a2.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-121a2.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dephosphorylation (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA si:ch211-121a2.2-004 (1) 562
    mRNA si:ch211-121a2.2-201 (1) 1527
    si:ch211-121a2.2-202 (1) 515
    si:ch211-121a2.2-204 (1) 814
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-121a2.2 No data available
    MARKER RELATIONSHIPS
    si:ch211-121a2.2 Contained in: [BAC] CH211-121A2 (1) (order this)
    si:ch211-121a2.2 Encodes: [cDNA] MGC:171669 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001105111 (1) 1536 bp
    Genomic GenBank:BX511260 (1) 190733 bp
    Select Tool
    Polypeptide UniProtKB:A7MBU0 (1) 449 aa
    Sequence Clusters UniGene:117428 (1)
    Sequence Information (all 17)
    OTHER si:ch211-121a2.2 GENE PAGES
  • Alliance (1)
  • Gene:564515 (1)
  • VEGA:OTTDARG00000024801 (1)
  • Ensembl(GRCz11):ENSDARG00000039682 (1)
  • ORTHOLOGY for si:ch211-121a2.2 ( Chr: 20 )
    CITATIONS (13)