ZFIN ID: ZDB-GENE-070613-1
Gene Name: plexin A3
Gene Symbol: plxna3    Nomenclature History

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Previous Names: set, sidetracked, vermicelli (1), vmc (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Exhibits identical protein binding activity. Involved in embryonic skeletal joint morphogenesis and nervous system development. Localizes to membrane. Is expressed in fin; nervous system; otic vesicle; and post-vent region. Orthologous to human PLXNA3 (plexin A3).
Genome Resources: Alliance (1),  Gene:567422 (1),  Ensembl(GRCz11):ENSDARG00000007172 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016252Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016463Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016464Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026705Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026706Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026708Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026709Tg Transgenic Insertion Unknown Unknown DNA
    la029523Tg Transgenic Insertion Unknown Unknown DNA
    la029524Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • p13umal Point Mutation Unknown Premature Stop ENU
    p24cree Unknown Unknown Unknown ENU
    p55emcf Unknown Unknown Unknown ENU
    rw260 Point Mutation Unknown Premature Stop ENU
    rw314 Point Mutation Unknown Missense ENU
    rw413 Point Mutation Unknown Missense ENU
    sa10020 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34308 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34309 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34310 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41125 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-plxna3
    1
    CRISPR2-plxna3
    1
    MO1-plxna3 N/A 5
    MO2-plxna3 N/A 1
    MO3-plxna3 N/A 1
    MO4-plxna3 N/A 1
    MO5-plxna3 N/A 1
    DISEASE ASSOCIATED WITH plxna3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH plxna3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension (more)
    Cellular Component membrane (more)
    Molecular Function identical protein binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA plxna3-201 (1)    Ensembl 6597
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM plxna3 No data available
    MARKER RELATIONSHIPS
    plxna3 Contained in: [BAC] DKEY-7I23 (1) (order this), DKEY-14I10 (1) (order this), DKEY-229J6 (1) (order this)
    plxna3 Encodes: [cDNA] MGC:195307 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001098489 (1) 6210 nt
    Genomic GenBank:BX284664 (1) 228202 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0A0MPG5 (1) 1892 aa
    Sequence Information (all 24)
    ORTHOLOGY for plxna3 ( Chr: 8 )
    CITATIONS (51)