ZFIN ID: ZDB-GENE-070424-95
Gene Name: solute carrier family 6 member 16b
Gene Symbol: slc6a16b    Nomenclature History

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Previous Names: si:ch1073-164k15.1, zgc:162925

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have neurotransmitter:sodium symporter activity. Predicted to localize to the plasma membrane. Orthologous to human SLC6A16 (solute carrier family 6 member 16).
Genome Resources: Alliance (1),  Gene:567809 (1),  Ensembl(GRCz11):ENSDARG00000102377 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24554 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32499 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44187 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc6a16b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc6a16b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process amino acid transmembrane transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function neurotransmitter:sodium symporter activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR000175 Sodium:neurotransmitter symporter
    Homologous_superfamily IPR037272 Sodium:neurotransmitter symporter superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc6a16b-201 (1)    Ensembl 2816
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc6a16b No data available
    MARKER RELATIONSHIPS
    slc6a16b Contained in: [Fosmid] CH1073-164K15 (1), ZFOS-696B10 (1)
    slc6a16b Encodes: [cDNA] MGC:162925 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001110474 (1) 2834 bp
    Genomic GenBank:FP236545 (1) 37503 bp
    Select Tool
    Polypeptide UniProtKB:A4QP62 (1) 676 aa
    Sequence Information (all 16)
    ORTHOLOGY for slc6a16b ( Chr: 24 )
    CITATIONS (15)