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ZIRC
ZFIN ID: ZDB-GENE-070424-90
Gene Name: CDK5 regulatory subunit associated protein 1
Gene Symbol: cdk5rap1    Nomenclature History

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Previous Name: zgc:162738

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have 4 iron, 4 sulfur cluster binding activity and transferase activity. Predicted to be involved in negative regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to localize to the mitochondrion. Orthologous to human CDK5RAP1 (CDK5 regulatory subunit associated protein 1).
Genome Resources: Alliance (1),  Gene:558659 (1),  Ensembl(GRCz11):ENSDARG00000044925 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9397 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35053 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cdk5rap1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdk5rap1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process tRNA modification (more)
    Cellular Component cytosol (more)
    Molecular Function 4 iron, 4 sulfur cluster binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdk5rap1-201 (1)    Ensembl 2122
    ncRNA cdk5rap1-002 (1)    Ensembl 1541
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdk5rap1
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(EPV.Tp1:cdk5rap1,myl7:EGFP) myl7 cdk5rap1EGFP Danio rerio 1 2
    MARKER RELATIONSHIPS
    cdk5rap1 Contained in: [BAC] DKEY-81L11 (1) (order this), DKEY-184M12 (1) (order this)
    cdk5rap1 Encodes: [EST] fs59b08
    [cDNA] MGC:162738 (1) (order this), MGC:173474 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001110379 (1) 1977 bp
    Genomic GenBank:CR385028 (1) 185870 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8PX77 (1) 577 aa
    Sequence Clusters UniGene:116926 (1)
    Sequence Information (all 26)
    ORTHOLOGY for cdk5rap1 ( Chr: 11 )
    CITATIONS (16)