ZFIN ID: ZDB-GENE-070424-74
Gene Name: forkhead box Q1a
Gene Symbol: foxq1a    Nomenclature History

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Previous Names: foxq1l, zgc:162905

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in response to xenobiotic stimulus. Predicted to localize to nucleus. Is expressed in gut; head; inter-frontal joint; and mesenchymal cell. Orthologous to human FOXQ1 (forkhead box Q1).
Genome Resources: Alliance (1),  Gene:100537750 (1),  Ensembl(GRCz11):ENSDARG00000030896 (2)
GENE EXPRESSION
All Expression Data: 6 figures from 3 publications
Wild-type Stages, Structures: Pharyngula:Prim-25 (36.0h-42.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
bcz11 Small Deletion Exon 3 Frameshift, Premature Stop CRISPR
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9415 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18716 Point Mutation Unknown Premature Stop ENU
    sa32819 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-foxq1a 1
    CRISPR2-foxq1a 1
    CRISPR3-foxq1a 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH foxq1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxq1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to xenobiotic stimulus (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA foxq1a-201 (1)    Ensembl 1378
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM foxq1a No data available
    MARKER RELATIONSHIPS
    foxq1a Contained in: [Fosmid] CH1073-460D17 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001243344 (1) 1399 nt
    Genomic GenBank:CU856140 (1) 35054 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IJS9 (1) 312 aa
    Sequence Information (all 22)
    ORTHOLOGY for foxq1a ( Chr: 2 )
    CITATIONS (20)