ZFIN ID: ZDB-GENE-070424-48
Gene Name: zgc:162971
Gene Symbol: zgc:162971    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus.
Genome Resources: Alliance (1),  Gene:100038783 (1),  Ensembl(GRCz11):ENSDARG00000101093 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10646 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39314 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:162971 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:162971 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:162971-201 (1)    Ensembl 756
    zgc:162971-202 (1)    Ensembl 1471
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:162971 No data available
    MARKER RELATIONSHIPS
    zgc:162971 Contained in: [BAC] DKEY-50I6 (1) (order this)
    zgc:162971 Encodes: [cDNA] MGC:162971 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001089563 (1) 1484 nt
    Genomic GenBank:BX510922 (1) 87532 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IDB0 (1) 419 aa
    Sequence Information (all 10)
    ORTHOLOGY for zgc:162971 ( Chr: 21 )
    CITATIONS (14)