ZFIN ID: ZDB-GENE-070424-31
Gene Name: transient receptor potential cation channel, subfamily M, member 1b
Gene Symbol: trpm1b    Nomenclature History

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Previous Names: trpm1a (1), zgc:162329

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have ion channel activity. Predicted to be involved in ion transport; protein tetramerization; and transmembrane transport. Predicted to localize to the integral component of membrane. Human ortholog(s) of this gene implicated in congenital stationary night blindness and congenital stationary night blindness 1C. Is expressed in melanoblast; neural crest cell; and retina. Orthologous to human TRPM1 (transient receptor potential cation channel subfamily M member 1).
Genome Resources: Alliance (1),  Gene:569946 (1),  Ensembl(GRCz11):ENSDARG00000103476 (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH trpm1b HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital stationary night blindness 1C Alliance Night blindness, congenital stationary (complete), 1C, autosomal recessive 613216
DISEASE ASSOCIATED WITH trpm1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ion transport (more)
Cellular Component integral component of membrane (more)
Molecular Function ion channel activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR005821 Ion transport domain
Domain IPR032415 TRPM, tetramerisation domain
Domain IPR041491 TRPM, SLOG domain
Homologous_superfamily IPR037162 TRPM, tetramerisation domain superfamily
TRANSCRIPTS No data available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM trpm1b No data available
MARKER RELATIONSHIPS
trpm1b Encodes: [cDNA] MGC:162329 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001110479 (1) 1706 nt
Genomic GenBank:CABZ01083725 (1) 22509 nt
Polypeptide UniProtKB:S5UFP7 (1) 1594 aa
Sequence Information (all 17)
ORTHOLOGY for trpm1b ( Chr: 25 )
CITATIONS (16)