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General Information
ZIRC
ZFIN ID: ZDB-GENE-070424-27
Gene Name: membrane-spanning 4-domains, subfamily A, member 17A.17
Gene Symbol: ms4a17a.17    Nomenclature History

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Previous Names: si:ch73-132m10.4, zgc:162210

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to localize to the integral component of membrane. Is expressed in neurons; pharynx; and pronephric glomerulus. Orthologous to several human genes including MS4A4A (membrane spanning 4-domains A4A).
Genome Resources: Alliance (1),  Gene:100002513 (1),  Ensembl(GRCz11):ENSDARG00000116378 (1)
GENE EXPRESSION
All Expression Data: Fig. 4 from Zuccolo et al., 2010
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6954 Point Mutation Unknown Premature Stop ENU
sa40337 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44595 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ms4a17a.17 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ms4a17a.17 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007237 (1)
  • InterPro:IPR030417 (1)
  • Pfam:PF04103 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ms4a17a.17-001 (1) 1605
    ms4a17a.17-002 (1) 885
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ms4a17a.17 No data available
    MARKER RELATIONSHIPS
    ms4a17a.17 Contained in: [BAC] CH73-132M10 (1) (order this), DKEY-204H11 (order this)
    ms4a17a.17 Encodes: [cDNA] MGC:162210 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089456 (1) 1576 bp
    Genomic GenBank:CR762404 (1) 180159 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q8D5 (1) 305 aa
    Sequence Clusters UniGene:77455 (1)
    Sequence Information (all 13)
    ORTHOLOGY for ms4a17a.17 ( Chr: 4 )
    CITATIONS (14)