ZFIN ID: ZDB-GENE-070424-161
Gene Name: finTRIM family, member 55
Gene Symbol: ftr55    Nomenclature History

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Previous Name: si:ch211-232d9.3 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have zinc ion binding activity.
Genome Resources: Alliance (1),  Gene:569296 (1),  Ensembl(GRCz11):ENSDARG00000009161 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11517 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36802 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ftr55 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ftr55 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000315 B-box-type zinc finger
    Domain IPR001841 Zinc finger, RING-type
    Domain IPR001870 B30.2/SPRY domain
    Domain IPR003877 SPRY domain
    Domain IPR003879 Butyrophylin-like, SPRY domain
    Domain IPR006574 SPRY-associated
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
    Conserved_site IPR017907 Zinc finger, RING-type, conserved site
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ftr55-201 (1)    Ensembl 1593
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ftr55 No data available
    MARKER RELATIONSHIPS
    ftr55 Contained in: [BAC] CH211-232D9 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045181 (1)
    Genomic GenBank:BX322664 (1) 157585 bp
    Select Tool
    Polypeptide UniProtKB:F1Q547 (1) 531 aa
    Sequence Information (all 6)
    ORTHOLOGY for ftr55 ( Chr: 19 )
    CITATIONS (15)