ZFIN ID: ZDB-GENE-070424-157
Gene Name: si:ch211-219a4.3
Gene Symbol: si:ch211-219a4.3
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:113527

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
Note:
AUTOMATED DESCRIPTION
Predicted to have NAD+ ADP-ribosyltransferase activity and RNA binding activity; orthologous to several human genes including PARP14 (poly(ADP-ribose) polymerase family member 14).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-219a4.3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-219a4.3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function NAD+ ADP-ribosyltransferase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR002589 (1)
  • InterPro:IPR004170 (1)
  • InterPro:IPR012317 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR034517 (1)
  • InterPro:IPR035979 (1)
  • InterPro:IPR037197 (1)
  • PROSITE:PS50102 (1)
  • PROSITE:PS50918 (1)
  • PROSITE:PS51059 (1)
  • PROSITE:PS51154 (1)
  • Pfam:PF00644 (1)
  • Pfam:PF01661 (1)
  • Pfam:PF02825 (1)
  • EC:2.4.2.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:ch211-219a4.3-001 (1) 5723
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-219a4.3 No data available
    MARKER RELATIONSHIPS
    si:ch211-219a4.3Contained in: [BAC] CH211-219A4 (1) (order this)
    si:ch211-219a4.3Encodes: [cDNA] MGC:113527 (1) (order this), MGC:172354 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114447 (1) 3064bp
    Genomic GenBank:CR533429 (1) 171970bp
    Select Tool
    Polypeptide UniProtKB:B0UYL3 (1) 1810aa
    Sequence Clusters UniGene:87350 (1)
    Sequence Information (all 16)
    OTHER si:ch211-219a4.3 GENE PAGES
  • Alliance (1)
  • Gene:791754 (1)
  • VEGA:OTTDARG00000021504 (1)
  • Ensembl(GRCz11):ENSDARG00000040445 (2)
  • ORTHOLOGY for si:ch211-219a4.3 (Chr: 9)
    CITATIONS (14)