ZFIN ID: ZDB-GENE-070410-99
Gene Name: replication factor C (activator 1) 1
Gene Symbol: rfc1    Nomenclature History

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Previous Names: si:dkey-170e5.1, zgc:162875 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have DNA clamp unloader activity. Predicted to localize to nucleus. Orthologous to human RFC1 (replication factor C subunit 1).
Genome Resources: Alliance (1),  Gene:100037336 (1), 
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ct151aGt Transgenic Insertion Unknown Unknown DNA
la021049Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11513 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19495 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38263 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko441a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko441b Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-rfc1 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rfc1 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Cerebellar ataxia, neuropathy, and vestibular areflexia syndrome 614575
    DISEASE ASSOCIATED WITH rfc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rfc1-201 (1)    Ensembl 4162
    rfc1-203 (1)    Ensembl 660
    ncRNA rfc1-002 (1)    Ensembl 314
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rfc1 No data available
    MARKER RELATIONSHIPS
    rfc1 Contained in: [BAC] DKEY-170E5 (1) (order this), DKEY-274K22 (1) (order this)
    rfc1 Has Artifact: [cDNA] MGC:162875 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001089491 (1) 2264 nt
    Genomic GenBank:CR759875 (1) 216255 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A4QP52 (1) 529 aa
    Sequence Information (all 12)
    ORTHOLOGY for rfc1 ( Chr: 1 )
    CITATIONS (24)