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ZIRC
ZFIN ID: ZDB-GENE-070321-1
Gene Name: odd-skipped related transcription factor 1
Gene Symbol: osr1    Nomenclature History

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Attributions

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Previous Names: MGC:101674, zgc:101674 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in several processes, including angioblast cell differentiation; nephron development; and regulation of endodermal cell differentiation. Predicted to localize to the nucleus. Is expressed in several structures, including endoderm; germ ring; head; mesoderm; and vasculature. Orthologous to human OSR1 (odd-skipped related transcription factor 1).
Genome Resources: Alliance (1),  Gene:450059 (1),  Ensembl(GRCz11):ENSDARG00000014091 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el593 Small Deletion Unknown Frameshift TALEN
sa15576 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-osr1 N/A 3
    MO2-osr1 N/A 5
    MO3-osr1 N/A 2
    TALEN1-osr1 1
    DISEASE ASSOCIATED WITH osr1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH osr1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process kidney development (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 22)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA osr1-201 (1)    Ensembl 1738
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM osr1 No data available
    MARKER RELATIONSHIPS
    osr1 Contained in: [BAC] DKEY-199E17 (1) (order this)
    osr1 Encodes: [EST] IMAGE:7157130 (1) (order this)
    [cDNA] MGC:101674 (1) (order this), MGC:191776 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006079 (1) 1758 bp
    Genomic GenBank:BX470107 (1) 252908 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B2GQ48 (1) 264 aa
    Sequence Clusters UniGene:13499 (1)
    Sequence Information (all 16)
    ORTHOLOGY for osr1 ( Chr: 13 )
    CITATIONS (34)