ZFIN ID: ZDB-GENE-070319-1
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Gene Name: recombination signal binding protein for immunoglobulin kappa J region b
Gene Symbol: rbpjb
Sequence Ontology ID : SO:0000704

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Previous Name: Su(H)2 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  eye, head, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa8403 Point Mutation Unknown Premature Stop ENU
sa34217 Point Mutation Unknown Splice Site ENU
Targeting reagents: MO1-rbpjb (1), MO2-rbpjb (1), MO4-rbpja,rbpjb, MO5-rbpja,rbpjb (1)
PHENOTYPE
Data: 3 figures from Echeverri et al., 2007
Observed in: heart, heart tube, post-vent region, Rohon-Beard neuron (all 5) expand
DISEASE ASSOCIATED WITH rbpjb HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Adams-Oliver syndrome Adams-Oliver syndrome 3 614814
GENE ONTOLOGY
Ontology GO Term
Biological Process adrenal gland development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 17)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008967 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR015350 (1)
  • InterPro:IPR015351 (1)
    		•
  • Pfam:PF09270 (1)
  • Pfam:PF09271 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rbpjb-001 (1) 3196
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rbpjb No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    rbpjbContained in: [BAC] CH211-234B14 (1) (order this), DKEY-39M14 (1) (order this), DKEYP-78B3 (1)
    rbpjbEncodes: [cDNA] MGC:171981 (1), MGC:194599 (1), MGC:194601 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001083551 (1) 3156bp
    Select Tool
    Genomic GenBank:BX664612 (1) 186965bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IGE4 (1) 492aa
    Select Tool
    Sequence Clusters UniGene:94721 (1)
    Sequence Information (all 26)
    OTHER rbpjb GENE PAGES
  • Gene:563306 (1)
  • VEGA:OTTDARG00000027415 (1)
  • Ensembl(GRCz10):ENSDARG00000052091 (1)
    • ORTHOLOGY for rbpjb (Chr: 7)
    CITATIONS (46)