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ZIRC
ZFIN ID: ZDB-GENE-070209-80
Gene Name: T-box transcription factor 3a
Gene Symbol: tbx3a
Sequence Ontology ID : SO:0001217

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Previous Names: tbx-b, tbx3, tbx3b, tbxb, zgc:158110 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II activating transcription factor binding activity; and RNA polymerase II regulatory region  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1334 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16346 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18035 Point Mutation Unknown Missense, Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa26643 Point Mutation Unknown Missense, Premature Stop ENU
    sa40617 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH tbx3a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ulnar-mammary syndrome Ulnar-mammary syndrome 181450
    DISEASE ASSOCIATED WITH tbx3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic heart tube development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 15)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbx3a-201 (1) 3872
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tbx3a No data available
    MARKER RELATIONSHIPS
    tbx3a Contained in: [BAC] CH211-245E21 (1) (order this)
    tbx3a Encodes: [cDNA] MGC:158110 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001101670 (1) 3947 bp
    Genomic GenBank:CU181811 (1) 144158 bp
    Select Tool
    Polypeptide UniProtKB:A2RUW2 (1) 689 aa
    Sequence Clusters UniGene:88318 (1)
    Sequence Information (all 13)
    ORTHOLOGY for tbx3a ( Chr: 5 )
    CITATIONS (32)