ZFIN ID: ZDB-GENE-070206-10
Gene Name: neurexin 3b
Gene Symbol: nrxn3b    Nomenclature History

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Previous Names: nrxn3ba, nrxn3bb

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Predicted to be involved in angiogenesis. Predicted to localize to integral component of membrane. Orthologous to human NRXN3 (neurexin 3).
Genome Resources: Alliance (1),  Gene:570698 (1),  Ensembl(GRCz11):ENSDARG00000062693 (2)
Note: nrxn3b has two isoforms, alpha(2 forms, DQ641435 and DQ641436) and beta (DQ641437)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013953Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021767Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021768Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021769Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028292Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7476 Point Mutation Unknown Missense ENU
    sa11015 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12447 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15937 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16685 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19226 Point Mutation Unknown Premature Stop ENU
    sa32273 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36960 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36961 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43379 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44933 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-nrxn3b
    2
    CRISPR2-nrxn3b
    2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nrxn3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nrxn3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nrxn3b-203 (1)    Ensembl 3077
    ncRNA nrxn3b-002 (1) 532
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nrxn3b No data available
    MARKER RELATIONSHIPS
    nrxn3b Contained in: [BAC] CH211-188E4 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080047 (1) 7620 nt
    Genomic GenBank:BX088548 (1) 152713 nt
    Select Tool
    Polypeptide UniProtKB:F1R5P7 (1) 1687 aa
    Sequence Information (all 45)
    ORTHOLOGY for nrxn3b ( Chr: 20 )
    CITATIONS (25)