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ZIRC
ZFIN ID: ZDB-GENE-070202-5
Gene Name: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b
Gene Symbol: hs3st3b1b    Nomenclature History

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Previous Names: 3-ost-3z (1), zf3-ost-3z (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity. Predicted to be involved in heparan sulfate proteoglycan biosynthetic process. Predicted to localize to the integral component of membrane. Is expressed in several structures, including dorsal fin fold; nervous system; pectoral fin bud; polster; and proctodeum. Orthologous to several human genes including HS3ST3B1 (heparan sulfate-glucosamine 3-sulfotransferase 3B1).
Genome Resources: Alliance (1),  Gene:558084 (1),  Ensembl(GRCz11):ENSDARG00000086645 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010055Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la012215Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-hs3st3b1b N/A 2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hs3st3b1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hs3st3b1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function sulfotransferase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000863 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR037359 (1)
  • Pfam:PF00685 (1)
  • EC:2.8.2.- (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hs3st3b1b-201 (1)    Ensembl 5335
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hs3st3b1b No data available
    MARKER RELATIONSHIPS
    hs3st3b1b Contained in: [BAC] CH211-233B17 (order this)
    hs3st3b1b Encodes: [cDNA] MGC:194482 (1) (order this), MGC:194484 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080568 (1) 1191 bp
    Genomic GenBank:CR847567 (1) 126967 bp
    Select Tool
    Polypeptide UniProtKB:A0MGY9 (1) 396 aa
    Sequence Clusters UniGene:139776 (1)
    Sequence Information (all 18)
    ORTHOLOGY for hs3st3b1b ( Chr: 12 )
    CITATIONS (24)