ZFIN ID: ZDB-GENE-070112-272
Gene Name: protein tyrosine phosphatase mitochondrial 1
Gene Symbol: ptpmt1
Sequence Ontology ID : SO:0000704

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Previous Names: im:7137979 (1), zgc:158719

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have phosphatidylglycerophosphatase activity and phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; predicted to be involved in protein dephosphorylation; orthologous to human  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7137979]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
f16 Insertion Exon 2 Frameshift, Premature Stop TALEN
sa31583 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. S2 from Nath et al., 2015
    Observed in:
    DISEASE ASSOCIATED WITH ptpmt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptpmt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dephosphorylation (more)
    Cellular Component mitochondrion (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000340 (1)
  • InterPro:IPR000387 (1)
  • InterPro:IPR016130 (1)
  • InterPro:IPR020422 (1)
  • InterPro:IPR024950 (1)
  • InterPro:IPR029021 (1)
  • PROSITE:PS00383 (1)
  • PROSITE:PS50056 (1)
  • Pfam:PF00782 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ptpmt1-003 (1) 783
    mRNA ptpmt1-201 (1) 1118
    ptpmt1-203 (1) 994
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptpmt1 No data available
    MARKER RELATIONSHIPS
    ptpmt1Contained in: [BAC] CH211-274E20 (1) (order this)
    ptpmt1Encodes: [EST] IMAGE:7137979 (1) (order this)
    [cDNA] MGC:158719 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080187 (1) 1091bp
    Genomic GenBank:CR318601 (1) 165501bp
    Select Tool
    Polypeptide UniProtKB:A1L293 (1) 183aa
    Sequence Clusters UniGene:79837 (1)
    Sequence Information (all 13)
    OTHER ptpmt1 GENE PAGES
  • Alliance (1)
  • Gene:567019 (1)
  • VEGA:OTTDARG00000027384 (1)
  • Ensembl(GRCz11):ENSDARG00000013860 (2)
  • ORTHOLOGY for ptpmt1 (Chr: 7)
    CITATIONS (21)