ZFIN ID: ZDB-GENE-070112-2212
Gene Name: TNF receptor-associated factor 7
Gene Symbol: traf7    Nomenclature History

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Previous Names: im:7149067, zgc:158391

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Orthologous to human TRAF7 (TNF receptor associated factor 7).
Genome Resources: Alliance (1),  Gene:563746 (1),  Ensembl(GRCz11):ENSDARG00000060207 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7149067]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14681 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30605 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH traf7 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Cardiac, facial, and digital anomalies with developmental delay 618164
    DISEASE ASSOCIATED WITH traf7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA traf7-201 (1)    Ensembl 3410
    ncRNA traf7-002 (1)    Ensembl 1284
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM traf7 No data available
    MARKER RELATIONSHIPS
    traf7 Contained in: [BAC] CH211-109O12 (1), DKEY-34B22 (order this)
    traf7 Encodes: [EST] IMAGE:7149067 (1)
    [cDNA] MGC:158391 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080185 (1) 3331 nt
    Genomic GenBank:BX572621 (1) 196336 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8QGD3 (1) 665 aa
    Sequence Information (all 15)
    ORTHOLOGY for traf7 ( Chr: 3 )
    CITATIONS (22)