ZFIN ID: ZDB-GENE-070112-2062
Gene Name: aldehyde dehydrogenase 16 family, member A1
Gene Symbol: aldh16a1    Nomenclature History

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Previous Names: im:7151472, zgc:158277

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Predicted to be involved in oxidation-reduction process. Is expressed in several structures, including intermediate cell mass of mesoderm; liver; neural tube; spinal cord; and vasculature. Orthologous to human ALDH16A1 (aldehyde dehydrogenase 16 family member A1).
Genome Resources: Alliance (1),  Gene:492710 (1),  Ensembl(GRCz11):ENSDARG00000037935 (2)
GENE EXPRESSION
All Expression Data: 6 figures from 2 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [IMAGE:7151472]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015169Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la024111Tg Transgenic Insertion Unknown Unknown DNA
    sa44563 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-aldh16a1 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aldh16a1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH aldh16a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component cellular_component (more)
    Molecular Function oxidoreductase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA aldh16a1-201 (1)    Ensembl 2850
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM aldh16a1 No data available
    MARKER RELATIONSHIPS
    aldh16a1 Contained in: [BAC] DKEY-237N7 (1) (order this)
    aldh16a1 Encodes: [EST] IMAGE:7151472 (1)
    [cDNA] MGC:158277 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001079954 (1) 2890 nt
    Genomic GenBank:BX511080 (1) 115272 nt
    Select Tool
    Polypeptide UniProtKB:F1QGP1 (1) 795 aa
    Sequence Information (all 15)
    ORTHOLOGY for aldh16a1 ( Chr: 3 )
    CITATIONS (26)