ZFIN ID: ZDB-GENE-070112-2032
Gene Name: pre-B-cell leukemia homeobox interacting protein 1b
Gene Symbol: pbxip1b    Nomenclature History

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Previous Names: im:7138234, wu:fb12b01, zgc:158151 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to be involved in regulation of Rho guanyl-nucleotide exchange factor activity. Predicted to localize to membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human PBXIP1 (PBX homeobox interacting protein 1).
Genome Resources: Alliance (1),  Gene:553293 (1),  Ensembl(GRCz11):ENSDARG00000011824 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16880 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31004 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36112 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pbxip1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pbxip1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of Rho guanyl-nucleotide exchange factor activity (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pbxip1b-201 (1)    Ensembl 1640
    pbxip1b-202 (1)    Ensembl 5603
    pbxip1b-203 (1)    Ensembl 528
    pbxip1b-204 (1)    Ensembl 825
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pbxip1b No data available
    MARKER RELATIONSHIPS
    pbxip1b Contained in: [BAC] DKEY-246I14 (1) (order this)
    pbxip1b Encodes: [EST] fb12b01, IMAGE:7138234 (1)
    [cDNA] MGC:158151 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001079956 (1) 5570 nt
    Genomic GenBank:CR854942 (1) 240480 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E7F6R0 (1) 852 aa
    Sequence Information (all 24)
    ORTHOLOGY for pbxip1b ( Chr: 16 )
    CITATIONS (21)