ZFIN ID: ZDB-GENE-070112-1492
Gene Name: solute carrier family 6 member 7
Gene Symbol: slc6a7    Nomenclature History

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Previous Name: zgc:158225 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have neurotransmitter:sodium symporter activity. Predicted to localize to the plasma membrane. Orthologous to human SLC6A7 (solute carrier family 6 member 7).
Genome Resources: Alliance (1),  Gene:562050 (1),  Ensembl(GRCz11):ENSDARG00000030006 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3130 Point Mutation Unknown Premature Stop ENU
sa43675 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc6a7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc6a7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function neurotransmitter:sodium symporter activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR000175 Sodium:neurotransmitter symporter
    Homologous_superfamily IPR037272 Sodium:neurotransmitter symporter superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc6a7-201 (1)    Ensembl 4329
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc6a7 No data available
    MARKER RELATIONSHIPS
    slc6a7 Contained in: [BAC] DKEY-22F5 (1) (order this)
    slc6a7 Encodes: [cDNA] MGC:158225 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080580 (1) 4086 bp
    Genomic GenBank:BX511168 (1) 263757 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R3N3 (1) 652 aa
    Sequence Information (all 11)
    ORTHOLOGY for slc6a7 ( Chr: 21 )
    CITATIONS (13)