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ZIRC
ZFIN ID: ZDB-GENE-070112-1462
Gene Name: beta-1,4-N-acetyl-galactosaminyl transferase 1a
Gene Symbol: b4galnt1a    Nomenclature History

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Previous Name: zgc:158609

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have transferase activity, transferring hexosyl groups. Predicted to be involved in lipid glycosylation. Predicted to localize to the integral component of Golgi membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 26. Orthologous to human B4GALNT1 (beta-1,4-N-acetyl-galactosaminyltransferase 1).
Genome Resources: Alliance (1),  Gene:558684 (1),  Ensembl(GRCz11):ENSDARG00000061520 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa25198 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH b4galnt1a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
hereditary spastic paraplegia 26 Alliance Spastic paraplegia 26, autosomal recessive 609195
DISEASE ASSOCIATED WITH b4galnt1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process lipid glycosylation (more)
Cellular Component Golgi apparatus (more)
Molecular Function transferase activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001173 (1)
  • InterPro:IPR011143 (1)
  • InterPro:IPR029044 (1)
  • Pfam:PF00535 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA b4galnt1a-201 (1)    Ensembl 2066
    b4galnt1a-202 (1)    Ensembl 788
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM b4galnt1a No data available
    MARKER RELATIONSHIPS
    b4galnt1a Contained in: [BAC] DKEY-228G21 (1) (order this)
    b4galnt1a Encodes: [cDNA] MGC:158609 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080570 (1) 2102 bp
    Genomic GenBank:BX663515 (1) 224215 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A1L229 (1) 532 aa
    Sequence Clusters UniGene:42820 (1)
    Sequence Information (all 14)
    ORTHOLOGY for b4galnt1a ( Chr: 23 )
    CITATIONS (14)