ZFIN ID: ZDB-GENE-070112-1412
Gene Name: SHQ1, H/ACA ribonucleoprotein assembly factor
Gene Symbol: shq1    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:158255

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have unfolded protein binding activity. Predicted to be involved in box H/ACA snoRNP assembly. Predicted to localize to cytoplasm and nucleoplasm. Orthologous to human SHQ1 (SHQ1, H/ACA ribonucleoprotein assembly factor).
Genome Resources: Alliance (1),  Gene:567601 (1),  Ensembl(GRCz11):ENSDARG00000058522 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11709 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa26812 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH shq1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH shq1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ribonucleoprotein complex assembly (more)
    Cellular Component cytoplasm (more)
    Molecular Function unfolded protein binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA shq1-201 (1)    Ensembl 4704
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM shq1 No data available
    MARKER RELATIONSHIPS
    shq1 Contained in: [BAC] CH211-194J9, DKEY-237J17 (1) (order this), RP71-15I6 (1)
    shq1 Encodes: [cDNA] MGC:158255 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080600 (1) 4719 nt
    Genomic GenBank:BX119974 (1) 213058 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QC67 (1) 586 aa
    Sequence Information (all 19)
    ORTHOLOGY for shq1 ( Chr: 6 )
    CITATIONS (22)