ZFIN ID: ZDB-GENE-070112-1372
Gene Name: transient receptor potential cation channel, subfamily M, member 1a
Gene Symbol: trpm1a    Nomenclature History

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Previous Names: trpm1, trpm1b (1), zgc:158632 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have cation channel activity. Predicted to be involved in several processes, including G protein-coupled glutamate receptor signaling pathway; cellular response to light stimulus; and protein tetramerization. Predicted to localize to the integral component of membrane. Human ortholog(s) of this gene implicated in congenital stationary night blindness and congenital stationary night blindness 1C. Is expressed in optic furrow; presumptive retinal pigmented epithelium; retinal inner nuclear layer; and retinal pigmented epithelium. Orthologous to human TRPM1 (transient receptor potential cation channel subfamily M member 1).
Genome Resources: Alliance (1),  Gene:791196 (1),  Ensembl(GRCz11):ENSDARG00000011259 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10436 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10704 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11580 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15286 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30632 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38616 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40908 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40909 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44666 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trpm1a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    congenital stationary night blindness 1C Alliance Night blindness, congenital stationary (complete), 1C, autosomal recessive 613216
    DISEASE ASSOCIATED WITH trpm1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to light stimulus (more)
    Cellular Component integral component of membrane (more)
    Molecular Function cation channel activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR005821 Ion transport domain
    Domain IPR032415 TRPM, tetramerisation domain
    Domain IPR041491 TRPM, SLOG domain
    Family IPR029588 Transient receptor potential cation channel subfamily M member 1
    Homologous_superfamily IPR037162 TRPM, tetramerisation domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trpm1a-201 (1)    Ensembl 5842
    trpm1a-203 (1)    Ensembl 1351
    trpm1a-204 (1)    Ensembl 872
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM trpm1a No data available
    MARKER RELATIONSHIPS
    trpm1a Contained in: [BAC] CH211-112G6 (1)
    trpm1a Encodes: [cDNA] MGC:158632 (1), MGC:191192 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080678 (1) 1368 nt
    Genomic GenBank:CR450827 (1) 174505 nt
    Select Tool
    Polypeptide UniProtKB:E7FDL5 (1) 1546 aa
    Sequence Information (all 27)
    ORTHOLOGY for trpm1a ( Chr: 7 )
    CITATIONS (20)