ZFIN ID: ZDB-GENE-061221-2
Gene Name: transmembrane O-mannosyltransferase targeting cadherins 3
Gene Symbol: tmtc3    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in lissencephaly. Orthologous to human TMTC3 (transmembrane O-mannosyltransferase targeting cadherins 3).
Genome Resources: Alliance (1),  Gene:100150181 (1),  Ensembl(GRCz11):ENSDARG00000062846 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023184Tg Transgenic Insertion Unknown Unknown DNA
sa16523 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17975 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24646 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45850 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tmtc3 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Lissencephaly 8 617255
    DISEASE ASSOCIATED WITH tmtc3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tmtc3-201 (1)    Ensembl 630
    tmtc3-202 (1)    Ensembl 5589
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tmtc3 No data available
    MARKER RELATIONSHIPS
    tmtc3 Contained in: [BAC] CH211-244M13 (1), DKEY-30I6 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_001922451 (1) 5848 nt
    Genomic GenBank:BX901919 (1) 233401 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E7FG92 (1) 932 aa
    Sequence Information (all 10)
    ORTHOLOGY for tmtc3 ( Chr: 25 )
    CITATIONS (19)