ZFIN ID: ZDB-GENE-061215-80
Gene Name: TRIO and F-actin binding protein b
Gene Symbol: triobpb

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Previous Names: triobp, fi20a11, si:ch73-211l13.4, wu:fi20a11, zgc:158267

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa804 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39968 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH triobpb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal recessive nonsyndromic deafness 28 Deafness, autosomal recessive 28 609823
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of actin cytoskeleton organization (more)
    Molecular Function actin filament binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001849 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR029908 (1)
  • PROSITE:PS50003 (1)
  • Pfam:PF00169 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA triobpb-001 (1) 1770
    ncRNA triobpb-002 (1) 1796
    mRNA triobpb-003 (1) 393
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM triobpb No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    triobpbContained in: [BAC] CH73-211L13 (1) (order this)
    triobpbEncodes: [EST] fi20a11
    [cDNA] MGC:158267 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001327809 (1) 2306bp
    Genomic GenBank:CU672266 (1) 104622bp
    Select Tool
    Polypeptide UniProtKB:F1RCU4 (1) 521aa
    Sequence Clusters UniGene:80449 (1)
    Sequence Information (all 15)
    OTHER triobpb GENE PAGES
  • Gene:790927 (1)
  • VEGA:OTTDARG00000034398 (1)
  • Ensembl(GRCz10):ENSDARG00000006385 (1)
  • ORTHOLOGY for triobpb (Chr: 3)
    Species Symbol Chromosome Accession # Evidence
    Human TRIOBP 22
  • Gene:11078
  • OMIM:609761
  • HGNC:17009
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Triobp 15
  • MGI:1349410
  • Gene:110253
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (13)