ZFIN ID: ZDB-GENE-061215-80
Gene Name: TRIO and F-actin binding protein b
Gene Symbol: triobpb
Previous Names: triobp, fi20a11, wu:fi20a11, zgc:158267
Location: Chr: 3   Details
Nomenclature History
GENE EXPRESSION No data available
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: triobpbsa804/sa804(Tupfel long fin)

Allele Type Mutagen Suppliers
sa804 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH triobpb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal recessive nonsyndromic deafness Deafness, autosomal recessive 28 609823
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of actin cytoskeleton organization (more)
    Molecular Function actin filament binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001849 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR029908 (1)
  • PROSITE:PS50003 (1)
  • Pfam:PF00169 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA triobpb-001 (1) 1770
    ncRNA triobpb-002 (1) 1796
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM triobpb No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    triobpb Contained in: [BAC] CH73-211L13 (1) (order this)
    triobpb Encodes: [EST] fi20a11
    [cDNA] MGC:158267 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080072 (1) 1832 bp
    Genomic GenBank:CU672266 (1) 104622 bp
    Select Tool
    Polypeptide UniProtKB:E7F449 (1) 555 aa
    Sequence Clusters UniGene:80449 (1)
    Sequence Information (all 15)
    OTHER triobpb GENE PAGES
  • Gene:790927 (1)
  • VEGA:OTTDARG00000034398 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish triobpb 3  
    Human TRIOBP 22 (22q13.1)
  • OMIM:609761
  • Gene:11078
  • Mouse Triobp 15 ( 37.70 cM)
  • MGI:1349410
  • Gene:110253
  • Orthology Details
    CITATIONS (10)