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ZIRC
ZFIN ID: ZDB-GENE-061215-78
Gene Name: zgc:158445
Gene Symbol: zgc:158445    Nomenclature History

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Previous Name: si:ch211-133n4.8

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have hydrolase activity; metal ion binding activity; and nucleic acid binding activity. Orthologous to human ENDOD1 (endonuclease domain containing 1).
Genome Resources: Alliance (1),  Gene:798069 (1),  Ensembl(GRCz11):ENSDARG00000071223 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020802Tg Transgenic Insertion Unknown Unknown DNA
sa36760 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:158445 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:158445 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001604 (1)
  • InterPro:IPR020821 (1)
  • InterPro:IPR039015 (1)
  • Pfam:PF01223 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:158445-201 (1)    Ensembl 1200
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:158445 No data available
    MARKER RELATIONSHIPS
    zgc:158445 Contained in: [BAC] CH211-133N4 (1) (order this)
    zgc:158445 Encodes: [cDNA] MGC:158445 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080071 (1) 1225 bp
    Genomic GenBank:AL928975 (1) 174480 bp
    Select Tool
    Polypeptide UniProtKB:A1A5Z9 (1) 265 aa
    Sequence Clusters UniGene:88393 (1)
    Sequence Information (all 13)
    ORTHOLOGY for zgc:158445 ( Chr: 19 )
    CITATIONS (15)